SRX6813070
tou-MiMIC-Cp190-1.fastq.gz

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Larvae
Cell type
Brains and imaginal discs
NA
NA

Attributes by original data submitter

Sample

strain
not applicable
isolate
not applicable
breed
not applicable
cultivar
not applicable
ecotype
not applicable
age
3rd instar larvae
dev_stage
3rd instar larvae
sex
not collected
tissue
brains and imaginal disks
genotype
tou-MiMIC-Cp190-1.fastq.gz

Sequenced DNA Library

library_name
tou-MiMIC-Cp190-1.fastq.gz
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
14523695
Reads aligned (%)
80.3
Duplicates removed (%)
27.9
Number of peaks
8159 (qval < 1E-05)

dm3

Number of total reads
14523695
Reads aligned (%)
80.5
Duplicates removed (%)
27.1
Number of peaks
8063 (qval < 1E-05)

Base call quality data from DBCLS SRA