SRX6755800
ChIP-seq &MNase-seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Cardiovascular
Cell type
Cardiac cells
NA
NA

Attributes by original data submitter

Sample

strain
C57BL6
age
1 day neonate
sex
not applicable
tissue
cardiac

Sequenced DNA Library

library_name
CM49
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina NovaSeq 6000

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
28320004
Reads aligned (%)
91.3
Duplicates removed (%)
15.2
Number of peaks
172 (qval < 1E-05)

mm9

Number of total reads
28320004
Reads aligned (%)
91.1
Duplicates removed (%)
15.6
Number of peaks
165 (qval < 1E-05)

Base call quality data from DBCLS SRA