Antigen

Antigen Class

TFs and others

Antigen

NRF1

Cell type

Cell type Class

Breast

Cell type

T-47D

Primary Tissue

Breast

Tissue Diagnosis

Adenocarcinoma Ductal

Sample

source_name

T47D breast cancer cells

cell line

T47D

antibody

NRF1 antibody

antibody manufacturer

Abcam

antibody catalog number

AB55744

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Lysates were clarified from sonicated nuclei and histone-DNA complexes were isolated with antibody. Libraries were constructed by using Illumina ChIP-Seq library preparation kit as instructed

Sequencing Platform

instrument_model

Illumina HiSeq 2000

hg38

Number of total reads

129009863

Reads aligned (%)

91.4

Duplicates removed (%)

68.2

Number of peaks

10797 (qval < 1E-05)

hg19

Number of total reads

129009863

Reads aligned (%)

90.7

Duplicates removed (%)

69.8

Number of peaks

10561 (qval < 1E-05)