Antigen

Antigen Class

TFs and others

Antigen

ATF6

Cell type

Cell type Class

Blood

Cell type

Treg

NA

NA

Sample

source_name

FACS-sorted memory Tregs

tag

FACS-sorted memory Tregs from blood

chip antibody

anti-ATF6 (sc-166659, lot # K 1617, Santa Cruz Biotechnology)

affectedstatus

Auto-immune hepatitis

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Indexed libraries that met appropriate cut-offs were quantified by qRT-PCR (KAPA Biosystems) and insert size distribution determined with the LabChip GX.

Sequencing Platform

instrument_model

Illumina HiSeq 4000

hg38

Number of total reads

24982522

Reads aligned (%)

97.8

Duplicates removed (%)

16.7

Number of peaks

773 (qval < 1E-05)

hg19

Number of total reads

24982522

Reads aligned (%)

96.4

Duplicates removed (%)

17.0

Number of peaks

327 (qval < 1E-05)