Antigen

Antigen Class

Unclassified

Antigen

Unclassified

Cell type

Cell type Class

Embryonic fibroblast

Cell type

MEF

Tissue

Embryonic Fibroblast

Lineage

primaryCells

Description

Mouse Embryonic Fibroblast

Sample

source_name

MEFs cells knockout MED23

cell type

mouse embryonic fibroblast

genotype/variation

MED23 knockout

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Cell lysates were sonicated and immunoprecipitated DNA-protein complex using antibody. ChIP DNA libraries were prepared for sequencing using standard Illumina protocols

Sequencing Platform

instrument_model

Illumina Genome Analyzer IIx

mm10

Number of total reads

38530359

Reads aligned (%)

98.6

Duplicates removed (%)

12.3

Number of peaks

465 (qval < 1E-05)

mm9

Number of total reads

38530359

Reads aligned (%)

98.5

Duplicates removed (%)

12.4

Number of peaks

471 (qval < 1E-05)