SRX651750
Genome-wide locatlization analyses of PU1 (1h LG268) binding sites

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Unclassified
Cell type
Unclassified
NA
NA

Attributes by original data submitter

Sample

strain
C57BL/6J

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiScanSQ

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
9464864
Reads aligned (%)
96.0
Duplicates removed (%)
13.0
Number of peaks
12693 (qval < 1E-05)

mm9

Number of total reads
9464864
Reads aligned (%)
95.5
Duplicates removed (%)
12.9
Number of peaks
12695 (qval < 1E-05)

Base call quality data from DBCLS SRA