Antigen

Antigen Class

Input control

Antigen

Input control

Cell type

Cell type Class

Blood

Cell type

Jurkat

Primary Tissue

Blood

Tissue Diagnosis

Leukemia Acute Lymphocytic

Sample

source_name

Jurkat culture cells_input

cell line

Jurkat

chip antibody

none (input)

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Chromatin Immunoprecipitation with antibodies against specific histone modifications. Libraries were prepared according to manufacturer's instructions using Illumina TrueSeq ChIP-seq Library Preparation Kit (Ref # 15034288). At least 1ng DNA was used for each library preparation.

Sequencing Platform

instrument_model

Illumina Genome Analyzer II

hg38

Number of total reads

39490745

Reads aligned (%)

99.0

Duplicates removed (%)

35.7

Number of peaks

1153 (qval < 1E-05)

hg19

Number of total reads

39490745

Reads aligned (%)

98.0

Duplicates removed (%)

37.8

Number of peaks

1336 (qval < 1E-05)