Antigen

Antigen Class

TFs and others

Antigen

Pml

Cell type

Cell type Class

Liver

Cell type

AML12

Tissue

Liver

Cell Type

Hepatocyte

Disease

Normal

Sample

source_name

shTopors

cell line

AML12 cells

genotype/variation

shTopors

chip antibody

anti-PML: Millipore, Cat#05-718; RRID: AB_309932

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

PML ChIP was done as previously described (Lund et al., 2014) from 5×10^6 cells. Illumina sequencing library were prepared according to the standard Illumina protocol.

Sequencing Platform

instrument_model

Illumina HiSeq X Ten

mm10

Number of total reads

29233109

Reads aligned (%)

97.2

Duplicates removed (%)

29.2

Number of peaks

212 (qval < 1E-05)

mm9

Number of total reads

29233109

Reads aligned (%)

97.1

Duplicates removed (%)

29.1

Number of peaks

209 (qval < 1E-05)