SRX6430373
RAL-177 in stress conditions for ATAC-seq replicate 3

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
ATAC-Seq
Antigen
ATAC-Seq

Cell type

Cell type Class
Adult
Cell type
Midgut
NA
NA

Attributes by original data submitter

Sample

strain
RAL-177
age
4-6 days
dev_stage
Adult
sex
female
tissue
Midgut
treatment
Exposure to malathion at 20uM for 9 hours
replicate
224A

Sequenced DNA Library

library_name
224A
library_strategy
ATAC-seq
library_source
GENOMIC
library_selection
PCR

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
22437430
Reads aligned (%)
0.0
Duplicates removed (%)
18.9
Number of peaks
3148 (qval < 1E-05)

dm3

Number of total reads
22437430
Reads aligned (%)
0.0
Duplicates removed (%)
16.1
Number of peaks
3175 (qval < 1E-05)

Base call quality data from DBCLS SRA