Antigen

Antigen Class

ATAC-Seq

Antigen

ATAC-Seq

Cell type

Cell type Class

Blood

Cell type

Bone Marrow Cells

MeSH Description

Cells contained in the bone marrow including fat cells (see ADIPOCYTES); STROMAL CELLS; MEGAKARYOCYTES; and the immediate precursors of most blood cells.

Sample

source_name

Bone Marrow

genotype

Pten:beta-cat(Act.)

tissue

Bone Marrow

cell type

Blast

treatment

[Low]DXR + Chemotherapy

Sequenced DNA Library

library_strategy

ATAC-seq

library_source

GENOMIC

library_selection

other

library_construction_protocol

Samples were prepared using Illumina Cat#FC-121-1030 following the protocol of PMID25559105 Library was constructed using Illumina Cat#FC-121-1030 following the protocol of PMID25559105

Sequencing Platform

instrument_model

NextSeq 500

mm10

Number of total reads

91445239

Reads aligned (%)

95.9

Duplicates removed (%)

34.6

Number of peaks

76188 (qval < 1E-05)

mm9

Number of total reads

91445239

Reads aligned (%)

95.8

Duplicates removed (%)

34.7

Number of peaks

76244 (qval < 1E-05)