GSM3900500: HeLa shControl dox r1 ATAC-Seq; Homo sapiens; ATAC-seq
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
ATAC-Seq
Antigen
ATAC-Seq
Cell type
Cell type Class
Uterus
Cell type
HeLa
Primary Tissue
Cervix
Tissue Diagnosis
Adenocarcinoma
Attributes by original data submitter
Sample
source_name
HeLa_shControl_dox_ATAC-Seq
cell line
HeLa
cell type
cervical adenocarcinoma
cell source
ATCC#CCL-2
modification
Tet-pLKO_shControl stable cells
Sequenced DNA Library
library_strategy
ATAC-seq
library_source
GENOMIC
library_selection
other
library_construction_protocol
ATAC-seq experiments were performed as previously described (Corces,et al., 2017) with the following modification: 40,000 cells for each cell line were used to perform the transposon reaction and DNA libraries were quantified using Qubit dsDNA high sensitivity reagents (Thermo Fisher Scientific) and measured Qubit 2 fluorometer ATAC-seq libraries were performed as previously described (Corces,et al., 2017)