Antigen

Antigen Class

ATAC-Seq

Antigen

ATAC-Seq

Cell type

Cell type Class

Blood

Cell type

Pro-B cells

NA

NA

Sample

source_name

pre-proB cells

genotype

Rag1CreT/+;Ergdelta/delta

Sequenced DNA Library

library_strategy

ATAC-seq

library_source

GENOMIC

library_selection

other

library_construction_protocol

Nuclei were extracted using a cytoplasmic lysis buffer. Extracted nuclei were tagmented using the Tn5 enzyme from the Nextera DNA library preparation Kit.

Sequencing Platform

instrument_model

NextSeq 500

mm10

Number of total reads

85994030

Reads aligned (%)

86.6

Duplicates removed (%)

40.0

Number of peaks

61200 (qval < 1E-05)

mm9

Number of total reads

85994030

Reads aligned (%)

86.5

Duplicates removed (%)

40.1

Number of peaks

61150 (qval < 1E-05)