SRX6074322
Znhit1 fl/fl

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
ATAC-Seq
Antigen
ATAC-Seq

Cell type

Cell type Class
Blood
Cell type
Blood Cells
MeSH Description
The cells found in the body fluid circulating throughout the CARDIOVASCULAR SYSTEM.

Attributes by original data submitter

Sample

strain
C57BL/6
age
8 weeks
sex
missing
tissue
Lin-Sca1+cKit+ cells
biomaterial_provider
Model Animal Research Center of Nanjing University (MARC, Nanjing, China)
birth_location
Nanjing, China
treatment
KO

Sequenced DNA Library

library_name
Znhit1_fl/fl
library_strategy
ATAC-seq
library_source
GENOMIC
library_selection
other

Sequencing Platform

instrument_model
Illumina HiSeq X Ten

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
51860460
Reads aligned (%)
51.3
Duplicates removed (%)
75.8
Number of peaks
7485 (qval < 1E-05)

mm9

Number of total reads
51860460
Reads aligned (%)
51.2
Duplicates removed (%)
75.8
Number of peaks
7460 (qval < 1E-05)

Base call quality data from DBCLS SRA