Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

source_name
Mouse embryonic stem cells with Drosophila spike-in, tamoxifen-treated (72hr OHT), gDNA-seq
cell line
PRC1CPM
genotype
Ring1aI50A/D53K; Ring1b(WT->I53A/D56K)fl/fl; Rosa26::ERT2-Cre
clone
41
strain
E14
replicate
2
treatment agent
tamoxifen (OHT)
treatment time point
72 hr
spike-in reference organism
Drosophila melanogaster
spike-in cell line
SG4
ChIP
none
antibody
none

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

mm10

Number of total reads
13276564
Reads aligned (%)
87.1
Duplicates removed (%)
4.9
Number of peaks
163 (qval < 1E-05)

mm9

Number of total reads
13276564
Reads aligned (%)
87.0
Duplicates removed (%)
5.3
Number of peaks
155 (qval < 1E-05)

Base call quality data from DBCLS SRA