Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Ssrp1

Cell type

Cell type Class
Epidermis
Cell type
Dermal fibroblasts
NA
NA

Attributes by original data submitter

Sample

source_name
immortalized mouse skin fibroblasts, variant # 3
cell type
immortalized mouse skin fibroblasts, variant # 3
cell culture viarians
#3
chip-antibody
SSRP1 (BioLegend, 609702, 10D1)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

mm10

Number of total reads
43587172
Reads aligned (%)
97.9
Duplicates removed (%)
25.5
Number of peaks
156 (qval < 1E-05)

mm9

Number of total reads
43587172
Reads aligned (%)
97.8
Duplicates removed (%)
25.7
Number of peaks
136 (qval < 1E-05)

Base call quality data from DBCLS SRA