SRX5995077
input 10min

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Kidney
Cell type
293
Primary Tissue
Kidney
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

isolate
ATCC
age
Fetus
biomaterial_provider
Kevin Struhl, 240 Longwood Ave., Boston
sex
female
tissue
Kidney
cell_line
HEK293

Sequenced DNA Library

library_name
3
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
NextSeq 500

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
34330124
Reads aligned (%)
97.9
Duplicates removed (%)
3.6
Number of peaks
1433 (qval < 1E-05)

hg19

Number of total reads
34330124
Reads aligned (%)
97.2
Duplicates removed (%)
5.7
Number of peaks
1061 (qval < 1E-05)

Base call quality data from DBCLS SRA