Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Gonad
Cell type
Oviducts
MeSH Description
Ducts that serve exclusively for the passage of eggs from the ovaries to the exterior of the body. In non-mammals, they are termed oviducts. In mammals, they are highly specialized and known as FALLOPIAN TUBES.

Attributes by original data submitter

Sample

source_name
Oviduct
strain
Black 6

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
frozen tissue were ground, DNA was sonicated on S220 sonicator, and precipitated with H2Bub1 antibody Illumina protocol

Sequencing Platform

instrument_model
Illumina HiSeq 2500

mm10

Number of total reads
66362795
Reads aligned (%)
98.6
Duplicates removed (%)
12.9
Number of peaks
399 (qval < 1E-05)

mm9

Number of total reads
66362795
Reads aligned (%)
98.3
Duplicates removed (%)
12.9
Number of peaks
443 (qval < 1E-05)

Base call quality data from DBCLS SRA