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For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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For hg38
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For hg19
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: MYOG
wikigenes
PDBj
CellType: RH-4
ATCC
MeSH
RIKEN BRC
Variation
TogoVar
SRX5930149
GSM3831291: RH4 Ent6 MYOG; Homo sapiens; ChIP-Seq
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
TFs and others
Antigen
MYOG
Cell type
Cell type Class
Muscle
Cell type
RH-4
NA
NA
Attributes by original data submitter
Sample
source_name
RH4
antibody
Thermo (cat # MA1-41042)
enrichment target
MYOG
target function
Transcription Factor
treatment
Entinostat
Sequenced DNA Library
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
DNA was extracted from ChIP-seq samples prepared following the Active Motif ChIP-IT High Sensitivity kit protocol. Standard Illumina barcodes were introduced during library preparation
Sequencing Platform
instrument_model
NextSeq 500
Where can I get the processing logs?
Read processing pipeline
log
hg38
Number of total reads
45379636
Reads aligned (%)
94.1
Duplicates removed (%)
48.4
Number of peaks
2768 (qval < 1E-05)
hg19
Number of total reads
45379636
Reads aligned (%)
93.4
Duplicates removed (%)
50.4
Number of peaks
2436 (qval < 1E-05)
Base call quality data from
DBCLS SRA