Antigen

Antigen Class

No description

Antigen

NA

Cell type

Cell type Class

Embryonic fibroblast

Cell type

NIH/3T3

Primary Tissue

Embryo

Tissue Diagnosis

Normal

Sample

collection_date

2009-09-23

age

immortalised cell line

culture_collection

ATCC:NIH3T3

cell_line

NIH3T3

sex

not determined

collected_by

Sanij, E.

biomaterial_provider

Growth Control Laboratory, Peter MacCallum Cancer Centre

tissue

Fibroblasts

growth_protocol

NIH3T3 cells were cultured in Dulbecco modified Eagles medium (DMEM) with fetal bovine serum (FBS) at 37C

breed

NIH/swiss

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer II

mm10

Number of total reads

105310748

Reads aligned (%)

82.4

Duplicates removed (%)

57.8

Number of peaks

2937 (qval < 1E-05)

mm9

Number of total reads

105310748

Reads aligned (%)

82.1

Duplicates removed (%)

57.8

Number of peaks

3024 (qval < 1E-05)