Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H2A

Cell type

Cell type Class
Yeast strain
Cell type
JB2083
NA
NA

Attributes by original data submitter

Sample

source_name
Saccharomyces cerevisiae
strain
JB2083
genotype
Mat a ade2-1 his3-11 leu2-3 trp1-1 ura3-1 can1-100 UBR1::GAL1-10-Ubiquitin-M-LacI fragment-Myc-UBR1 (HIS3) leu2-3::pCM244 (CMVp-tetRprime-SSN6, LEU2) x3 CDC45::cdc45-td (CUP1p-Ub-DHFRts-HA-CDC45)(TRP1)
chip antibody
yH2A (1.6 ug/ml final concentration, Abcam, ab181447)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

sacCer3

Number of total reads
2050761
Reads aligned (%)
57.9
Duplicates removed (%)
3.9
Number of peaks
159 (qval < 1E-05)

Base call quality data from DBCLS SRA