Antigen

Antigen Class

Histone

Antigen

H3K4me2

Cell type

Cell type Class

Prostate

Cell type

LNCAP

Primary Tissue

Prostate

Tissue Diagnosis

Carcinoma

Sample

source_name

LNCaP_GSK24H

cell line

LNCaP

cell type

prostate cancer cell line

treatment

DHT with GSK2879552 for 24 hrs

chip antibody

H3K4me2 (Millipore, cat#07-030, lot#2919012)

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Libraries construction was performed using ThruPLEX DNA-seq 48D Kit (Rubicon Genomics)

Sequencing Platform

instrument_model

Illumina HiSeq 2000

hg38

Number of total reads

14596727

Reads aligned (%)

90.4

Duplicates removed (%)

2.1

Number of peaks

34766 (qval < 1E-05)

hg19

Number of total reads

14596727

Reads aligned (%)

89.9

Duplicates removed (%)

2.7

Number of peaks

34570 (qval < 1E-05)