Antigen

Antigen Class

Histone

Antigen

H3K4me2

Cell type

Cell type Class

Prostate

Cell type

LNCAP

Primary Tissue

Prostate

Tissue Diagnosis

Carcinoma

Sample

source_name

LNCaP_CTRL

cell line

LNCaP

cell type

prostate cancer cell line

treatment

vehicle without GSK

chip antibody

H3K4me2 (Millipore, cat#07-030, lot#2919012)

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Libraries construction was performed using ThruPLEX DNA-seq 48D Kit (Rubicon Genomics)

Sequencing Platform

instrument_model

Illumina HiSeq 2000

hg38

Number of total reads

15933167

Reads aligned (%)

93.8

Duplicates removed (%)

7.3

Number of peaks

31323 (qval < 1E-05)

hg19

Number of total reads

15933167

Reads aligned (%)

93.4

Duplicates removed (%)

7.8

Number of peaks

31926 (qval < 1E-05)