Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27ac

Cell type

Cell type Class
Embryo
Cell type
Embryonic brains
NA
NA

Attributes by original data submitter

Sample

source_name
CIC WT mouse brain E19
tissue
Brain
developmental stage
Embryonic day 19
mouse genotype
Nes-Cre;CIC+/+
chip antibody
abcam #ab4729

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

mm10

Number of total reads
62450647
Reads aligned (%)
92.7
Duplicates removed (%)
15.9
Number of peaks
5255 (qval < 1E-05)

mm9

Number of total reads
62450647
Reads aligned (%)
92.4
Duplicates removed (%)
15.9
Number of peaks
5437 (qval < 1E-05)

Base call quality data from DBCLS SRA