Antigen

Antigen Class

ATAC-Seq

Antigen

ATAC-Seq

Cell type

Cell type Class

Neural

Cell type

Hippocampus

MeSH Description

A curved elevation of GRAY MATTER extending the entire length of the floor of the TEMPORAL HORN of the LATERAL VENTRICLE (see also TEMPORAL LOBE). The hippocampus proper, subiculum, and DENTATE GYRUS constitute the hippocampal formation. Sometimes authors include the ENTORHINAL CORTEX in the hippocampal formation.

Sample

source_name

human embryonic hippocampus

gestational week

GW25

tissue

hippocampus

Sequenced DNA Library

library_strategy

ATAC-seq

library_source

GENOMIC

library_selection

other

library_construction_protocol

Fetal retina tissue samples were collected in ice-cold artificial cerebrospinal fluid (ACSF)

Sequencing Platform

instrument_model

Illumina HiSeq 4000

hg38

Number of total reads

95837617

Reads aligned (%)

51.9

Duplicates removed (%)

42.1

Number of peaks

1176 (qval < 1E-05)

hg19

Number of total reads

95837617

Reads aligned (%)

51.4

Duplicates removed (%)

42.5

Number of peaks

665 (qval < 1E-05)