Antigen

Antigen Class

No description

Antigen

NA

Cell type

Cell type Class

Bone

Cell type

U2OS

Tissue

bone

Lineage

mesoderm

Description

osteosarcoma from the tibia of a 15 year old, J. Ponten and E. Saksela derived this line (originally 2T) in 1964 from a moderately differentiated sarcoma, viruses were not detected during co-cultivation with WI-38 cells or in CF tests against SV40, RSV or adenoviruses, mycoplasma contamination was detected and eliminated in 1972, (PMID: 6081590)

Sample

isolate

Female

age

15

biomaterial_provider

ATCC

sex

female

tissue

Bone

cell_line

U-2 OS

cell_subtype

Replicate 1

cell_type

U-2 OS TetR Nrf1

disease

Osteosarcoma

sample_type

cell culture

treatment

Doxycycline ChIP-exo

Sequenced DNA Library

library_name

CN1C1

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina HiSeq 3000

hg38

Number of total reads

13944267

Reads aligned (%)

68.7

Duplicates removed (%)

13.0

Number of peaks

220 (qval < 1E-05)

hg19

Number of total reads

13944267

Reads aligned (%)

67.0

Duplicates removed (%)

17.5

Number of peaks

639 (qval < 1E-05)