Antigen

Antigen Class

Input control

Antigen

Input control

Cell type

Cell type Class

Liver

Cell type

Liver

MeSH Description

A large lobed glandular organ in the abdomen of vertebrates that is responsible for detoxification, metabolism, synthesis and storage of various substances.

Sample

source_name

mouse liver

strain

C57BL/6

tissue

liver

genotype

--

antibody

none (input)

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

ChIP-seq libraries were prepared according to Bernstein lab protocol with individual enzymes purchased from NEB

Sequencing Platform

instrument_model

Illumina HiSeq 2500

mm10

Number of total reads

100256591

Reads aligned (%)

94.8

Duplicates removed (%)

12.8

Number of peaks

328 (qval < 1E-05)

mm9

Number of total reads

100256591

Reads aligned (%)

94.7

Duplicates removed (%)

12.9

Number of peaks

311 (qval < 1E-05)