Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K79me2

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

source_name
mouse embryonic stem cells
cell type
Embryonic stem cells
treatment
SIRT6-Knock Out
passages
Passage 21
strain
Mouse strain:129 SvJae F1
chip antibody
H3K79me2 (Cell Signaling Technologies, cat# 5427)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

mm10

Number of total reads
13736892
Reads aligned (%)
97.6
Duplicates removed (%)
52.1
Number of peaks
194 (qval < 1E-05)

mm9

Number of total reads
13736892
Reads aligned (%)
97.5
Duplicates removed (%)
52.4
Number of peaks
192 (qval < 1E-05)

Base call quality data from DBCLS SRA