Sample information curated by ChIP-Atlas

Antigen

Antigen Class
ATAC-Seq
Antigen
ATAC-Seq

Cell type

Cell type Class
Blood
Cell type
Bone Marrow Cells
MeSH Description
Cells contained in the bone marrow including fat cells (see ADIPOCYTES); STROMAL CELLS; MEGAKARYOCYTES; and the immediate precursors of most blood cells.

Attributes by original data submitter

Sample

source_name
Lin- Sca1+ Kit+ cd135- cd34- Bone marrow cells
cell types
Mouse-derived Bone marrow cells
tissue origin
Bone marrow
cell subtype
Lin- Sca1+ Kit+ cd135- cd34-
genotype/variation
WT

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

mm10

Number of total reads
41707615
Reads aligned (%)
94.8
Duplicates removed (%)
22.9
Number of peaks
20625 (qval < 1E-05)

mm9

Number of total reads
41707615
Reads aligned (%)
94.7
Duplicates removed (%)
22.9
Number of peaks
20585 (qval < 1E-05)

Base call quality data from DBCLS SRA