Sample information curated by ChIP-Atlas

Antigen

Antigen Class
ATAC-Seq
Antigen
ATAC-Seq

Cell type

Cell type Class
Blood
Cell type
Mixture of monocytes and T cells
NA
NA

Attributes by original data submitter

Sample

source_name
All Cells
cell type
Mixture of Monocytes and T cells
treatment
n/a

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
55613241
Reads aligned (%)
95.2
Duplicates removed (%)
57.8
Number of peaks
17911 (qval < 1E-05)

hg19

Number of total reads
55613241
Reads aligned (%)
94.9
Duplicates removed (%)
58.1
Number of peaks
17909 (qval < 1E-05)

Base call quality data from DBCLS SRA