Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

source_name
Fucci-Jarid2 fl/fl mESCs
tissue
Fucci-Jarid2 fl/fl mESCs
cell type
Mouse embryonic stem cells
strain
Mixed background: 129/Sv / C57BL/C6
developmental stage
E3.5

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

mm10

Number of total reads
53329821
Reads aligned (%)
90.1
Duplicates removed (%)
19.7
Number of peaks
588 (qval < 1E-05)

mm9

Number of total reads
53329821
Reads aligned (%)
89.9
Duplicates removed (%)
19.7
Number of peaks
644 (qval < 1E-05)

Base call quality data from DBCLS SRA