Antigen

Antigen Class

Input control

Antigen

Input control

Cell type

Cell type Class

Blood

Cell type

Dendritic Cells

MeSH Description

ANTIGEN-PRESENTING CELLS of dendritic cell morphology found in the LYMPH NODES and other lymphoid tissues.

Sample

source_name

DC18h_Input-ChIP

donr id

donorK

tissue/cell type

MO-derived

cell subtype

primary monocyte-derived dendritic cells

chip antibody

none

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

ChIPseq was essentially done as described (Pham et al. 2012). Libraries were generated as described (Pham et al. 2012)

Sequencing Platform

instrument_model

Illumina HiSeq 1000

hg38

Number of total reads

27180483

Reads aligned (%)

98.7

Duplicates removed (%)

5.8

Number of peaks

1053 (qval < 1E-05)

hg19

Number of total reads

27180483

Reads aligned (%)

97.9

Duplicates removed (%)

6.8

Number of peaks

1073 (qval < 1E-05)