Antigen

Antigen Class

TFs and others

Antigen

Suz12

Cell type

Cell type Class

Pluripotent stem cell

Cell type

ES cells

NA

NA

Sample

source_name

Embryonic stem cells

strain

129B6F1

chip antibody

Suz12 (Cell Signaling, Rabbit mAb, D39F6)

genotype

Jarid2 KO

experiment type

ChIP-Seq

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Immunoprecipitation of formaldehyde cross-linked and sonicated cell lysate. NEBNext Ultra II protocol (NEB, E7645S)

Sequencing Platform

instrument_model

NextSeq 500

mm10

Number of total reads

19852409

Reads aligned (%)

93.7

Duplicates removed (%)

17.8

Number of peaks

4693 (qval < 1E-05)

mm9

Number of total reads

19852409

Reads aligned (%)

93.5

Duplicates removed (%)

17.9

Number of peaks

4683 (qval < 1E-05)