GSM3632989: shCHD1-XE-1 1 (ATAC-seq); Homo sapiens; ATAC-seq
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
ATAC-Seq
Antigen
ATAC-Seq
Cell type
Cell type Class
Prostate
Cell type
LNCAP
Primary Tissue
Prostate
Tissue Diagnosis
Carcinoma
Attributes by original data submitter
Sample
source_name
shCHD1-XE-1_1
cell line
LNCaP/AR cells
transduction
shCHD1-1
genotype
deletion of CHD1 genes
Sequenced DNA Library
library_strategy
ATAC-seq
library_source
GENOMIC
library_selection
other
library_construction_protocol
DNA and ATAC-seq samples were generated as previously described protocol (Buenrostro et al 2016). RNA libraries were prepared for sequencing using standard Illumina protocols