Antigen

Antigen Class

TFs and others

Antigen

ALKBH3

Cell type

Cell type Class

Prostate

Cell type

PC-3

Primary Tissue

Prostate

Tissue Diagnosis

Adenocarcinoma

Sample

source_name

PC3

chip antibody

ALKBH3 Millipore (#09-882)

cell line

PC3

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Genomic DNA were extracted using ALKBH3 or IgG antibodies and subsequent purified. Libraries were constructed of 50 ng of ChIP DNA following Illumina’s® protocol

Sequencing Platform

instrument_model

Illumina Genome Analyzer

hg38

Number of total reads

25008871

Reads aligned (%)

90.3

Duplicates removed (%)

31.4

Number of peaks

1047 (qval < 1E-05)

hg19

Number of total reads

25008871

Reads aligned (%)

89.6

Duplicates removed (%)

32.9

Number of peaks

1256 (qval < 1E-05)