SRX5355581
ChIP-Seq of b16-f10 cell line

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Epidermis
Cell type
B16-F10
Primary Tissue
Skin
Tissue Diagnosis
Melanoma

Attributes by original data submitter

Sample

strain
C57BL/6J
age
not applicable
sex
not applicable
tissue
not applicable
cell_line
B16-F10
treatment
MRE11 ChIP-Seq in B16-F10 cells edited with Pcsk9-gP+G gRNA and WT Cas9_12h

Sequenced DNA Library

library_name
BW31_b16_gpg_12h
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 4000

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
15232061
Reads aligned (%)
83.5
Duplicates removed (%)
16.3
Number of peaks
131 (qval < 1E-05)

mm9

Number of total reads
15232061
Reads aligned (%)
83.5
Duplicates removed (%)
16.2
Number of peaks
92 (qval < 1E-05)

Base call quality data from DBCLS SRA