Antigen

Antigen Class

TFs and others

Antigen

Stat1

Cell type

Cell type Class

Blood

Cell type

Macrophages

MeSH Description

The relatively long-lived phagocytic cell of mammalian tissues that are derived from blood MONOCYTES. Main types are PERITONEAL MACROPHAGES; ALVEOLAR MACROPHAGES; HISTIOCYTES; KUPFFER CELLS of the liver; and OSTEOCLASTS. They may further differentiate within chronic inflammatory lesions to EPITHELIOID CELLS or may fuse to form FOREIGN BODY GIANT CELLS or LANGHANS GIANT CELLS. (from The Dictionary of Cell Biology, Lackie and Dow, 3rd ed.)

Sample

source_name

Peritoneal Exudate Macrophages (PEC)

strain

C56Bl6/J

genotype

wild type

cell type

Peritoneal Exudate Macrophages (PEC)

treatment

Untreated

chip antibody

anti-STAT1 (Santa Cruz, sc-592)

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

ChIP-Seq library preparation was performed as described in Ostuni et al., Cell 2013

Sequencing Platform

instrument_model

Illumina Genome Analyzer II

mm10

Number of total reads

31121753

Reads aligned (%)

81.3

Duplicates removed (%)

11.1

Number of peaks

689 (qval < 1E-05)

mm9

Number of total reads

31121753

Reads aligned (%)

81.2

Duplicates removed (%)

11.2

Number of peaks

675 (qval < 1E-05)