SRX5237620
WT-input

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

strain
C57BL/6
replicate
rep1
dev_stage
ES
sex
male
tissue
cell line
cell_type
WT-input
treatment
input

Sequenced DNA Library

library_name
WT-input
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
NextSeq 500

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
52558974
Reads aligned (%)
98.5
Duplicates removed (%)
17.2
Number of peaks
594 (qval < 1E-05)

mm9

Number of total reads
52558974
Reads aligned (%)
98.3
Duplicates removed (%)
17.2
Number of peaks
704 (qval < 1E-05)

Base call quality data from DBCLS SRA