Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
SMARCA4

Cell type

Cell type Class
Others
Cell type
Mel270
NA
NA

Attributes by original data submitter

Sample

source_name
MEL270
cell line
MEL270
lentiviral vector
pINDUCER-FLAG-SF3B1_K700E
chip antibody
BRG1 / SMARCA4 (Abcam EPNCIR111A)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
19879373
Reads aligned (%)
95.3
Duplicates removed (%)
18.9
Number of peaks
43653 (qval < 1E-05)

hg19

Number of total reads
19879373
Reads aligned (%)
94.9
Duplicates removed (%)
19.3
Number of peaks
44483 (qval < 1E-05)

Base call quality data from DBCLS SRA