SRX5206464
Rex1WT2

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

strain
C57BL/9
replicate
rep2
dev_stage
ES
sex
male
tissue
cell line

Sequenced DNA Library

library_name
Rex1WT2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
39006050
Reads aligned (%)
98.1
Duplicates removed (%)
19.4
Number of peaks
6581 (qval < 1E-05)

mm9

Number of total reads
39006050
Reads aligned (%)
97.8
Duplicates removed (%)
19.3
Number of peaks
7076 (qval < 1E-05)

Base call quality data from DBCLS SRA