Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
SMARCA4

Cell type

Cell type Class
Uterus
Cell type
Endometrial epithelial cells
NA
NA

Attributes by original data submitter

Sample

source_name
endometrial epithelial cells
cell type
endometrial epithelial cells
genotype
ARID1A WT
biological replicate
1
technical replicate
2
chip antibody
BRG1 (Abcam, #ab110641)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg19

Number of total reads
29664402
Reads aligned (%)
86.0
Duplicates removed (%)
11.0
Number of peaks
18506 (qval < 1E-05)

hg38

Number of total reads
29664402
Reads aligned (%)
87.7
Duplicates removed (%)
9.9
Number of peaks
18569 (qval < 1E-05)

Base call quality data from DBCLS SRA