Sample information curated by ChIP-Atlas

Antigen

Antigen Class
ATAC-Seq
Antigen
ATAC-Seq

Cell type

Cell type Class
Embryo
Cell type
2-cell stage
NA
NA

Attributes by original data submitter

Sample

source_name
2-cell embryos
strain
NSA(CF-1) x B6SJLF1/J
treatment
DMSO
tissue
2-cell embryos

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

mm10

Number of total reads
144471823
Reads aligned (%)
97.2
Duplicates removed (%)
83.1
Number of peaks
43587 (qval < 1E-05)

mm9

Number of total reads
144471823
Reads aligned (%)
97.2
Duplicates removed (%)
83.2
Number of peaks
43540 (qval < 1E-05)

Base call quality data from DBCLS SRA