Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
AR

Cell type

Cell type Class
Prostate
Cell type
22Rv1
Primary Tissue
Prostate
Tissue Diagnosis
Carcinoma

Attributes by original data submitter

Sample

source_name
22RV1
cell line
22RV1
foxa1 genotype
WT/I360*
target
AR
foxa1 antibody
NA
crispr clone
yes
overexpression
no

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg19

Number of total reads
26422728
Reads aligned (%)
189.3
Duplicates removed (%)
2.0
Number of peaks
1483 (qval < 1E-05)

hg38

Number of total reads
26422728
Reads aligned (%)
191.1
Duplicates removed (%)
2.1
Number of peaks
1794 (qval < 1E-05)

Base call quality data from DBCLS SRA