Antigen

Antigen Class

ATAC-Seq

Antigen

ATAC-Seq

Cell type

Cell type Class

Embryo

Cell type

Embryonic limb

NA

NA

Sample

source_name

Limb

genotype

Lmbr1deltaprom/deltaprom

embryonic stage

Embryonic day 10.5

strain

G4

Sequenced DNA Library

library_strategy

ATAC-seq

library_source

GENOMIC

library_selection

other

library_construction_protocol

50.000 cells were used for each reaction of tagmentation and protocol was performed as previously described (Buenrostro JD et al., 2015). Libraries were prepared using the Nextera adaptors and sequenced

Sequencing Platform

instrument_model

Illumina HiSeq 2500

mm10

Number of total reads

52731363

Reads aligned (%)

97.9

Duplicates removed (%)

16.7

Number of peaks

22853 (qval < 1E-05)

mm9

Number of total reads

52731363

Reads aligned (%)

97.8

Duplicates removed (%)

16.8

Number of peaks

22804 (qval < 1E-05)