Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
CTCF

Cell type

Cell type Class
Neural
Cell type
Fetal neural progenitor cells
NA
NA

Attributes by original data submitter

Sample

age
5 day
donor ID
ENCDO222AAA
dev stage
embryonic
sample type
in vitro differentiated cells
cell type
neural progenitor cell
sex
female
health state
healthy
lab
Richard Myers, HAIB

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
36469426
Reads aligned (%)
95.7
Duplicates removed (%)
11.5
Number of peaks
57315 (qval < 1E-05)

hg19

Number of total reads
36469426
Reads aligned (%)
95.0
Duplicates removed (%)
12.3
Number of peaks
57010 (qval < 1E-05)

Base call quality data from DBCLS SRA