SRX506010
BCL6 CHIPseq GH 48H

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Embryonic fibroblast
Cell type
3T3-F442A
NA
NA

Attributes by original data submitter

Sample

breed
NA
strain
NA
age
embryonic fibroblasts
biomaterial_provider
3T3-F442A pre-adipocyte line
sex
unknown
tissue
3T3-F442A adipocytes
stud_book_number
GH 48H

Sequenced DNA Library

library_name
BCL6 CHIPseq GH 48H
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
19693422
Reads aligned (%)
26.1
Duplicates removed (%)
10.8
Number of peaks
1945 (qval < 1E-05)

mm9

Number of total reads
19693422
Reads aligned (%)
26.1
Duplicates removed (%)
11.1
Number of peaks
1974 (qval < 1E-05)

Base call quality data from DBCLS SRA