Antigen

Antigen Class

No description

Antigen

NA

Cell type

Cell type Class

Liver

Cell type

Liver

MeSH Description

A large lobed glandular organ in the abdomen of vertebrates that is responsible for detoxification, metabolism, synthesis and storage of various substances.

Sample

strain

HM08

dev_stage

adult

sex

not applicable

tissue

humanized liver

disease

HCV-infected (genotype 1b)

genotype

cDNA-uPA+/+/SCID+/+ (uPA/SCID) mice

sample_type

tissue sample

treatment

Naïve

Sequenced DNA Library

library_name

HM08

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina HiSeq 4000

mm10

Number of total reads

67032639

Reads aligned (%)

46.2

Duplicates removed (%)

21.3

Number of peaks

10930 (qval < 1E-05)

mm9

Number of total reads

67032639

Reads aligned (%)

46.1

Duplicates removed (%)

21.4

Number of peaks

10923 (qval < 1E-05)