Antigen

Antigen Class

Histone

Antigen

H3K27ac

Cell type

Cell type Class

Liver

Cell type

Hepatocytes

MeSH Description

The main structural component of the LIVER. They are specialized EPITHELIAL CELLS that are organized into interconnected plates called lobules.

Sample

source_name

H3K27ac ChIP-seq MPH Thapsi

strain background

C57Bl6

genotype/variation

WT

age

adult

Sex

male

cell type

mouse primary hepatocytes (MPH)

treatment

1µM thapsigargin for 4hrs

chip antibody

H3K27ac (Active Motif, Cat. # 39685)

Sequenced DNA Library

library_name

ERROR: cannot retrieve data from NCBI: too many requests

library_strategy

ERROR: cannot retrieve data from NCBI: too many requests

library_source

ERROR: cannot retrieve data from NCBI: too many requests

library_selection

ERROR: cannot retrieve data from NCBI: too many requests

library_construction_protocol

ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model

ERROR: cannot retrieve data from NCBI: too many requests

cycle_sequence

ERROR: cannot retrieve data from NCBI: too many requests

cycle_count

ERROR: cannot retrieve data from NCBI: too many requests

flow_sequence

ERROR: cannot retrieve data from NCBI: too many requests

flow_count

ERROR: cannot retrieve data from NCBI: too many requests

key_sequence

ERROR: cannot retrieve data from NCBI: too many requests

mm10

Number of total reads

52352538

Reads aligned (%)

78.2

Duplicates removed (%)

22.4

Number of peaks

26728 (qval < 1E-05)

mm9

Number of total reads

52352538

Reads aligned (%)

78.1

Duplicates removed (%)

22.5

Number of peaks

26777 (qval < 1E-05)