SRX495031
GSM1217451: seq-Ab8895 H3K4me1 fem2 AD ChIP Rep1; Caenorhabditis elegans; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me1

Cell type

Cell type Class
Adult
Cell type
Germline containing young adult
NA
NA

Attributes by original data submitter

Sample

source_name
seq-Ab8895_H3K4me1_fem2_AD_ChIP_Rep1
strain
fem-2(b245)
developmental stage
Germline containing young adult
genotype
fem-2(b245)III
Sex
hermaphrodite

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

Where can I get the processing logs?

Read processing pipeline log

ce11

Number of total reads
20667922
Reads aligned (%)
84.1
Duplicates removed (%)
11.1
Number of peaks
3395 (qval < 1E-05)

ce10

Number of total reads
20667922
Reads aligned (%)
84.1
Duplicates removed (%)
11.1
Number of peaks
3395 (qval < 1E-05)

Base call quality data from DBCLS SRA