Antigen

Antigen Class

Bisulfite-Seq

Antigen

Bisulfite-Seq

Cell type

Cell type Class

Liver

Cell type

Liver

MeSH Description

A large lobed glandular organ in the abdomen of vertebrates that is responsible for detoxification, metabolism, synthesis and storage of various substances.

Sample

source_name

Liver

strain

C57BL/6

gender

male

genotype

Wild Type

tissue

Liver

Sequenced DNA Library

library_strategy

Bisulfite-Seq

library_source

GENOMIC

library_selection

RANDOM

library_construction_protocol

DNA was isolated from 3-10 of frozen tissue Libraries were prepared using Reduced Representation Bisulfite Sequencing. Five to seven samples were pooled together using Illumina's TrueSeq Nano DNA LT adaptors.

Sequencing Platform

instrument_model

HiSeq X Ten

mm10

Number of total reads

33210887

Reads aligned (%)

79.2

Coverage rate (×)

3.6

Number of hyper MRs

128653 (qval < 1E-05)

mm9

Number of total reads

33210887

Reads aligned (%)

79.2

Coverage rate (×)

3.6

Number of hyper MRs

128477 (qval < 1E-05)