SRX485302
Genome-wide mapping of ZFP809 binding sites

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Unclassified
Cell type
Unclassified
NA
NA

Attributes by original data submitter

Sample

strain
129/B6
age
n/a
biomaterial_provider
n/a
sex
not determined
tissue
cell line

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
165065671
Reads aligned (%)
97.8
Duplicates removed (%)
13.0
Number of peaks
1517 (qval < 1E-05)

mm9

Number of total reads
165065671
Reads aligned (%)
97.6
Duplicates removed (%)
12.9
Number of peaks
1616 (qval < 1E-05)

Base call quality data from DBCLS SRA